| Biological Sciences Division | The University of Chicago
Predicting RNA splicing from DNA sequence using Pangolin.
Predicting RNA splicing from DNA sequence using Pangolin. Genome Biol. 2022 04 21; 23(1):103.
PMID: 35449021
Benchmarking sequencing methods and tools that facilitate the study of alternative polyadenylation.
Benchmarking sequencing methods and tools that facilitate the study of alternative polyadenylation. Genome Biol. 2021 10 14; 22(1):291.
PMID: 34649612
The impact of cell type and context-dependent regulatory variants on human immune traits.
The impact of cell type and context-dependent regulatory variants on human immune traits. Genome Biol. 2021 04 29; 22(1):122.
PMID: 33926512
Alignment of single-cell RNA-seq samples without overcorrection using kernel density matching.
Alignment of single-cell RNA-seq samples without overcorrection using kernel density matching. Genome Res. 2021 04; 31(4):698-712.
PMID: 33741686
Identification and Quantification of Splicing Quantitative Trait Loci.
Identification and Quantification of Splicing Quantitative Trait Loci. Methods Mol Biol. 2020; 2082:51-62.
PMID: 31849007
m6A mRNA Methylation Is Essential for Oligodendrocyte Maturation and CNS Myelination.
m6A mRNA Methylation Is Essential for Oligodendrocyte Maturation and CNS Myelination. Neuron. 2020 01 22; 105(2):293-309.e5.
PMID: 31901304
Trans Effects on Gene Expression Can Drive Omnigenic Inheritance.
Trans Effects on Gene Expression Can Drive Omnigenic Inheritance. Cell. 2019 05 02; 177(4):1022-1034.e6.
PMID: 31051098
Discovery and characterization of variance QTLs in human induced pluripotent stem cells.
Discovery and characterization of variance QTLs in human induced pluripotent stem cells. PLoS Genet. 2019 04; 15(4):e1008045.
PMID: 31002671
Prioritizing Parkinson’s disease genes using population-scale transcriptomic data.
Prioritizing Parkinson’s disease genes using population-scale transcriptomic data. Nat Commun. 2019 03 01; 10(1):994.
PMID: 30824768
Annotation-free quantification of RNA splicing using LeafCutter.
Annotation-free quantification of RNA splicing using LeafCutter. Nat Genet. 2018 01; 50(1):151-158.
PMID: 29229983
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